- Research article
- Open Access
The testis-specific Cα2 subunit of PKA is kinetically indistinguishable from the common Cα1 subunit of PKA
BMC Biochemistry volume 12, Article number: 40 (2011)
The two variants of the α-form of the catalytic (C) subunit of protein kinase A (PKA), designated Cα1 and Cα2, are encoded by the PRKACA gene. Whereas Cα1 is ubiquitous, Cα2 expression is restricted to the sperm cell. Cα1 and Cα2 are encoded with different N-terminal domains. In Cα1 but not Cα2 the N-terminal end introduces three sites for posttranslational modifications which include myristylation at Gly1, Asp-specific deamidation at Asn2 and autophosphorylation at Ser10. Previous reports have implicated specific biological features correlating with these modifications on Cα1. Since Cα2 is not modified in the same way as Cα1 we tested if they have distinct biochemical activities that may be reflected in different biological properties.
We show that Cα2 interacts with the two major forms of the regulatory subunit (R) of PKA, RI and RII, to form cAMP-sensitive PKAI and PKAII holoenzymes both in vitro and in vivo as is also the case with Cα1. Moreover, using Surface Plasmon Resonance (SPR), we show that the interaction patterns of the physiological inhibitors RI, RII and PKI were comparable for Cα2 and Cα1. This is also the case for their potency to inhibit catalytic activities of Cα2 and Cα1.
We conclude that the regulatory complexes formed with either Cα1 or Cα2, respectively, are indistinguishable.
Cyclic 3', 5'-adenosine monophosphate (cAMP) is a key intracellular signaling molecule, whose main function is to activate the cAMP-dependent protein kinase (PKA) . PKA is a heterotetrameric holoenzyme consisting of a regulatory (R) subunit dimer and two catalytic (C) subunits. The holoenzyme is activated when four molecules of cAMP bind to the R subunit dimer, two to each R subunit, releasing two free active C subunits [2;3]. In man, four different R subunits designated RIα, RIβ RIIα, RIIβ (reviewed in ), and four different C subunits (Cα, Cβ, Cγ and PrKX) have been identified . The Cα and Cβ subunits are expressed in most tissues, while the Cγ subunit, which is transcribed from an intron-less gene, represents a retroposon derived from the Cα subunit . Cγ is only expressed in human testis . PrKX is an X chromosome-encoded protein kinase, and was identified as a PKA C subunit since it is inhibited by both PKI and RIα, and the RIα/PrKX complex is activated by cAMP .
Splice variants of both Cα and Cβ have been identified. In the case of Cα, two splice variants have been identified and termed Cα1  and Cα2 [9–11]. Cα1 and Cα2 have non-identical N-terminal ends encoded by alternative use of two exons (1a and 1b, mouse terminology) located upstream of exon 2 in the murine Cα gene. The Cβ gene encodes a number of products identified in various species and have been designated Cβ1, Cβ2, Cβ3, Cβ4, Cβ3ab, Cβ3b, Cβ3abc, Cβ4ab, Cβ4b, Cβ4abc [12–17]. As is the case for the Cα forms, all the Cβ variants have variable N-terminal ends which are encoded by different exons upstream of exon 2 in the Cβ gene [14;15].
PKA-C splice variants are tissue-specifically expressed and some experimental evidence support that they may harbor specific features and non-identical activities when associated with the R subunits to form holoenzymes [18;19]. With regard to this Cα2 it is the sole C subunit expressed in the sperm cell. Moreover, Cα2 was shown to be vital for mouse sperm motility since ablation rendered the sperm cells non-motile and the male individuals infertile [9-11;20].
Cα1 is equipped with an N-terminal of 14 amino acids which undergo three well defined co- and posttranslational modifications. They include in vivo myristylation of Gly1 . At position +1 an Asn is encoded which is partly deamidated in vivo leading to Cα1-Asp2 and Cα1-iso(β)Asp2 . A third modification is identified as a PKA-autophosphorylation site at Ser10 [23–25]. Cα2 on the other hand is encoded with 7 unique amino acids at the N-terminus which to our knowledge do not have the ability to undergo any of the N-terminal modifications seen for Cα1.
Based on the different N-terminal sequences of Cα1 and Cα2 we speculate that they will introduce distinct biological features to these subunits. To investigate this hypothesis we made a thorough characterization of Cα2 activities both in vivo and in vitro and compared the results to what is known for Cα1 and to results obtained for Cα1 in the present work.
Sperm cell isolation
Semen samples were obtained from patients attending infertility investigations at the Andrology Laboratory at Rikshospitalet-Radiumhospitalet HF, Oslo, Norway. All patients signed a letter of approval and all experiments were done according to the recommendation from the Regional Committees for Medical and Health Research Ethics. All men produced their ejaculates on site or at home after 3-5 days of sexual abstinence. Samples were collected by masturbation into a wide-mouthed sterile container (Sarstedt Ltd., Leicester, United Kingdom) and after 30 min of liquefaction at 37°C, sperm parameters were evaluated according to World Health Organization (WHO) methods (World Health Organization, WHO laboratory manual for the examination of human semen and sperm-cervical mucus interaction (4th ed.), Cambridge University Press, Cambridge (1999).
Sperm cells were isolated from the seminal plasma by percoll gradient centrifugation. Sperm samples were pipetted on top of a 90%/45% percoll gradient and centrifuged at 2500 rpm for 20 min, no brake. After centrifugation, the sperm pellet was recovered by first using a sterile glass Pasteur pipette to remove the top layers of the semen sample and sperm gradient, leaving approximately 0.5 mL of the bottom layer. The sperm pellet was subsequently resuspended and washed twice in phosphate buffered saline (PBS) and centrifuged again at 2500 rpm for 8 min.
Sperm head and tail separation
Isolated sperm cells were diluted to 1 mill/mL in PBS and sonicated mildly for 10 sec at low frequency. Ten μL samples were taken out to be examined by microscopy to assure head and tail separation. After complete separation the mixture was centrifuged at 400 g for 10 min. The supernatant containing the tails was transferred to a new tube and tails pelleted by centrifugation at 10.000 × g for 15 min. The tail pellet and the pellet from the first centrifugation were separately solubelized in RIPA buffer (10 mM Tris-HCl pH 7.5, 1 mM EDTA, 1% Triton X-100, 0.1% SDS, 0.1% Na-deoxycholate and 100 mM NaCl) containing 1 mM DTT, 1 mM PMSF and protease inhibitor cocktail (Roche), and sonicated 2 × 10 seconds at full effect.
SDS-polyacrylamide gel electrophoresis (SDS-PAGE)
SDS-PAGE, was performed as described by . Briefly, samples were diluted in SDS sample buffer (62.5 mM Tris-HCl, pH 6.8, 2.3% SDS, 10% glycerol, 5% β-mercaptoethanol, 0.001% bromophenol blue), boiled for 2 min and loaded onto slab gels consisting of a 4.5% stacking gel and a 12.5% separating gel.
Lysates were cleared by centrifugation at 15000 g for 30 min at 4°C, and subsequently incubated with primary antibody [anti-Cα2 (SNO101; 320 μg/mL), mouse anti-RIα (2.5 μg/mL), rabbit anti-RIIα serum diluted 1:100] for 2 h to overnight. Antibody-antigen complexes were precipitated using either Dynabeads protein G (Dynal, catalogue number 100.04), anti-mouse agarose beads or anti-rabbit agarose beads (Sigma, catalogue number A6531, A1027). Precipitates were washed three times using appropriate buffer and extracted with buffer in the presence or absence of 1 mm 8-CPT cAMP as indicated in the figure legends.
Total protein was estimated by Bradford protein assay (BioRad). Proteins were separated by SDS-PAGE and transferred to PVDF membranes by electro blotting. Membranes were blocked in 5% skimmed milk powder in Tris-buffered saline containing 0.1% Tween-20 (TBST) for 1 h at room temperature, and then incubated for 1 h at room temperature or overnight at 4°C with the appropriate primary antibodies diluted in TBST rabbit polyclonal anti-C 1:1000 (Santa Cruz Biotechnology), anti-Cα2 (SNO101), mouse anti-RIα 1:250 and rabbit anti-RIIα serum . Membranes were washed for about 1 h in TBST and further incubated with HRP-conjugated secondary antibodies (ICN Diagnostics). Membranes were washed and finally developed using SuperSignal© West Pico Chemiluminescent (Pierce).
Endogenous sperm cell protein fractionation
Sperm cells were homogenized in PE buffer (5 mM KH2PO4, 5 mM K2HPO4, 1 mM EDTA, pH 6.8) containing 0.5% Triton X-100, 1 mM DTT, 1 mM PMSF and protease inhibitor cocktail (Roche), and sonicated 2 × 10 seconds. DEAE cellulose (Whatman DE 52) was applied to a column and equilibrated with PE buffer with 250 mM sucrose. The sperm cell homogenates were cleared by centrifugation at 15.000 g for 30 min at 4°C and applied to the column. After washing with PE buffer, the column was eluted with a linear 0-400 mM NaCl gradient created by a gradient mixer (total volume 50 ml), 1 ml fractions were collected and salt concentration checked by refractometry. Every other fraction, starting with fraction 1 was subjected to phosphotransferase activity measurements in the absence and presence of cAMP. Peak fractions were concentrated to 100 μl using centrifugal filters with 30 kDa cutoff (Millipore) and subjected to immunoblot analysis.
Catalytic activity of PKA was assayed by phosphorylating the PKA specific substrate Kemptide (Peninsula) using γ-[32P]ATP (5000 mCi/μmol) as previously described .
Specific activity is determined as U/mg, which is defined as μmol/mg × min.
Determination of specific cAMP-binding of soluble R subunits was carried out in a buffer containing 0.3 μmol [3H]-cAMP (spec. act. 41.7 Ci/mmol, Amersham) .
The activation assay of Cα2 and myrCα1 with RIα and RIIβ, respectively, was performed in a spectrophotometric kinase activity assay as described earlier .
Expression of Cα2, Cα1 and myristylated Cα1
Recombinant non-myristylated human Cα1 was expressed and purified as described previously [29;30]. Recombinant human Cα1, as well as recombinant human Ca2, were co-transformed with N-myristyl-transferase in Escherichia coli BL21 (DE3) (Novagen) and co-expressed with human Cα1 as well as Cα2 using the same conditions. Both proteins were purified by affinity chromatography using PKI-peptide Affi-Gel. The procedure was first described by Olsen et al.  and modified after Thullner et al. .
Expression and purification of R subunits
Recombinant human R subunits (hRIα, hRIβ, hRIIα, hRIIβ) were over-expressed in Escherichia coli BL21 (DE3) RIL (Novagen) and purified according to a procedure by Bertinetti et al.  using Sp-8-AEA-cAMPS-agarose.
The purity of the R and C proteins was confirmed by SDS-PAGE as well as by immunoblot analysis and the biological activity of the proteins was measured as described before . Primary sequence of Cα2 and the presence of N-myristylation at Cα1 were checked by mass spectrometry (Data not shown).
All SPR interaction analyses were performed at 25°C in 20 mM MOPS pH 7, 150 mM NaCl plus 0.005% (v/v) surfactant P20, 1 mM ATP, 5 mM MgCl2 and 50 μM EDTA using Biacore 2000 or 3000 instruments (GE Healthcare-Biacore, Sweden). For covalent coupling of the C subunits, carboxymethylated sensor chip surfaces (CM5, research grade, GE Healthcare) were activated with NHS/EDC for 7 min and non-myristylated Cα1, Cα2 and myrCα1 (5 μg/μl in 10 mM sodium acetate plus 200 μM ATP and 500 μM MgCl2 with a pH 6.0) as described  were injected on separate flow cells with a flow rate of 5 μl/min until approximately 300 response units (RU 1,000 RU = 1 ng/mm2 for a CM 5 chip)  were reached. This amine coupling was described previously [36;37]. Deactivation of the surface was performed using 1 M ethanolamine-HCl (pH 8.5) for 7 min. As a reference one flow cell was activated and deactivated in the absence of any protein.
The interaction experiments with four R subunit were performed at 25°C in running buffer (20 mM MOPS pH 7, 150 mM NaCl, 1 mM ATP, 5 mM MgCl2, 50 μM EDTA, 0.005% surfactant P20) at a flow rate of 30 μl/min. During simultaneous R subunit injection over the four surfaces (150 sec), the dissociation phase was monitored for 150 sec. The binding of R subunit to C subunit was not limited by mass transport according to previous experiments . Response of the activated/deactivated reference cell was subtracted. Surfaces were regenerated with two subsequent 1 min injections of 0,1 mM cAMP, 2,5 mM EDTA in running buffer. Evaluation of non-normalized data was performed with Biaevaluation 3.2 RC1 (GE Healthcare). A Langmuir 1:1 binding model was applied for the kinetic analysis of C subunit/R subunit interactions .
The sensor chip was stored at 4°C in running buffer and tested for proper performance prior to each analysis.
Sperm cell-specific Cα2 associates with RIα and RIIα in a cAMP-dependent fashion to form PKAI and PKAII holoenzymes in vivo
We first determined whether human sperm cells express Cα2. Protein extracts of T cells, whole sperm, sperm tail, and sperm heads were separated by SDS-PAGE transferred to immunoblot filters and filters probed with a pan-C antibody (Figure 1A, left panel, anti-C) and an anti-Cα2 antiserum (SNO 101, anti-Cα2 , Figure 1A, right panel). This confirms previous results that Cα2 is not expressed in T cells and is distributed in tail and head of spermatozoa . RI and RII are both expressed in all sperm cell compartments and are known to form PKA type I and type II (PKAI and PKAII) [39–41]. PKAI and PKAII holoenzymes can be separated by DEAE ion exchange chromatography using increasing concentrations of NaCl . Since Cα2 is the sole C subunit in human sperm cells it is expected that it will associate with RI and RII to form PKAI and PKAII, respectively, as has been demonstrated in the mouse . To test this, whole sperm cell extracts (3 mg) were fractionated on DEAE resins by a linear NaCl gradient ranging from 0 to 350 mM). Two peaks of phosphotransferase- (--●--) and cAMP-binding activity (--□--) between 50-100 mM and 100-250 mM NaCl, respectively, were observed. This implied formation of both PKAI and PKAII (Figure 1B). C and R subunit identity were documented by immunoblotting using a pan-C antibody (Figure 1, panel CI) and anti-Cα2 (panel CII) as well as anti-RIα (panel CIII) and anti-RIIα (panel CIV). This showed that immunoreactive Cα2 co-elutes with the two major R subunits in sperm cells, RIα (peak I) and RIIα (peak II) [43–45]. From the figure it is also seen that some of the C activity was detected before the R subunit activity in the first peak, implying free C subunit. Moreover, we also noted that PKAI and PKAII containing Cα2 eluted at comparable concentrations of NaCl. To further investigate whether human Cα2 forms PKAI and PKAII in cell extracts we immunoprecipitated (IPed) with anti-RIα and anti-RIIα (Figure 2). Using immunoblotting and anti-Cα2 (upper panels) and anti- pan-C (lower panels) we showed that both RIα and RIIα associate with Cα2, implying that Cα2 forms PKAI and II in vivo (lanes 6 and 12). To define whether the R-C interaction is specific and functional, the IPed proteins were challenged with cAMP to dissociate the holoenzyme into R subunit dimers and free C subunits . In these experiments the IPed R subunits would be expected to be immobilized by the precipitating antiserum and remain in the pellet (P) after the cAMP wash whereas the IPed C subunit would be released into the supernatant (S) in the presence of cAMP [46;47]. Figure 2 (lanes 3 and 4, and 9 and 10) depicts that immunoreactive Cα2 is released into the supernatant after the cAMP wash (+cAMP) after both anti-RIα and anti-RIIα IP (upper and lower panels) whereas the immunoreactive Cα2 subunit remained in the pellet (P) in the absence of cAMP (-cAMP) (Figure 2, lanes 5 and 6 and 11 and 12, upper and lower panels).
Comparable activities of Cα2 and Cα1
Our results and several reports showing that Cα2 associates with both RI and RII subunits [3; 48-50] in a cAMP-sensitive fashion imply that N-terminal differences do not interfere with PKA holoenzyme formation.. To further investigate wetherCα2 has activities that differ from Cα1 we expressed Cα2 using the pREST B vector. First we noted that Cα2 and Cα1 were captured in the soluble and particulate fractions of the bacteria lysates, respectively, suggesting differences in solubility (results not shown). Furthermore, specific activity of expressed Cα2 was determined to 18 ± 3 units/mg (U/mg, n = 3) which was notably lower than the specific activity of expressed Cα1 (28 ± 4 U/mg, Figure 3A). Taken together this may imply differential features of Cα1 and Cα2. Based on this and to determine the exact activities for Cα2 three features were investigated. These included (i) Cα2's substrate affinity, (ii) the ability to form holoenzymes with RI and RII in vitro and (iii) the Km values for Kemptide and ATP. In the latter case we found the Km values of Cα2 for Kemptide and ATP to be 27. 8 ± 2.3 μM and 11.5 ± 0.5 μM, respectively (Figure 3B and 3C). This is in good agreement with previous results obtained with expressed Cα1 .
We next monitored cAMP-sensitivity of type I and II PKA holoenzymes containing Cα2 in vitro. To calculate the accurate cAMP activation constant, PKAI (RIα) and PKAII (RIIβ) containing Cα2 holoenzymes were incubated with 250 μM Kemptide and 10 mM ATP in the presence of increasing concentrations of cAMP. Kact values for cAMP were 120 nM and 460 nM for the holoenzyme formed with RIα and RIIβ, respectively, showing that PKAI containing Cα2 are nearly 4 fold more sensitive to cAMP than PKAII containing Cα2 holoenzymes (figure 4A,B). The corresponding values for holoenzymes formed with myrCα1 were 99 nM (RIα) and 350 nM (RIIβ) (figure 4A,B) again demonstrating a 4 fold increased sensitivity for the RI holoenzyme. This is also in agreement with previous in vitro results for PKAI and II holoenzymes containing Cα1 [38;51], and the Kact values for mouse PKAI isolated from sperm cells ablated for PKAII (RIIα) . It should be noted that Kact in wild type sperm cells which mainly express PKAII (RIIα-Cα2)  is almost identical to the Kact in RIIα ablated sperm cells. This may suggest that PKAI and PKAII display comparable Kact's in vivo and hence contradicts the in vitro results demonstrated previously  and by us here. It should also be noted that PKAI although expressed at low levels may skew the observed Kact values, due to its sensitivity for cAMP. To what extent this has biological consequences as has been demonstrated for PKAI and PKAII in lymphoid cells [27;52;53], remains to be tested.
We then investigated the potency of the R subunits (RIα, RIIα, RIβ and RIIβ) and the protein kinase inhibitor PKIα to inhibit Cα2 phosphotransferase activity in vitro. Purified Cα2 (30 nM) was mixed with a fixed concentration of Kemptide (250 μM) in the presence of increasing concentrations of the various R subunits or PKIα. All the R subunits inhibited Cα2-dependent kinase activity by 50% at 15 nM and showed complete inhibition at a 1:1 molar ratio (Figure 5A and 5B). A fixed dose (28 nM) of Cα2 was inhibited by PKIα in a dose-dependent manner with complete inhibition at stoichiometric concentrations of Cα2 and PKIα (Figure 5C). The inhibitory effects of the various R subunits and PKI have previously been determined for Cα1 [7;29] and indicate that the efficiency in inhibiting Cα1 and Cα2 is similar for all R subunits and PKIα. Using a Biacore technology we next investigated the dissociation equilibrium constants (KD), association (kass) and dissociation (kdiss) rate constants for the various R subunits in association with either Cα1 or Cα2. We immobilized 300 RUs of myristylated Cα1 (myrCα1, see Methods) and Cα2 on separate flow cells of a CM5 Biacore sensor chip. Unmyristylated Cα1 was used as reference (data not shown). In the presence of 1 mM ATP and 5 mM MgCl2 the R subunits were simultaneously run over both C subunits on the sensor chip at a flow rate of 30 μL/min. In the case of RIα and RIβ they were run over the sensor chip at concentrations between 0.25 and 128 nM, and RIIα and RIIβ between 0.5 to 256 nM (raw data not shown). Figure 6 (panel A) shows representative runs of RIα, RIβ, RIIα and RIIβ (64 nM each; panel B) on Cα2 and myrCα1. The shape of the curves indicates that the relative on and off rates for RIα when associated with either Cα2 or myrCα1 were highly similar. The relative kass values were slightly different, 1.6 × 106 and 1.9 × 106 M-1s-1 for RIα versus myrCα1 and Cα2, respectively. The same was true for RIβ. However, in this case, although the KD value was almost identical to RIα, the association as well as the dissociation rate constants for RIβ was 2 times faster. Finally, no differences could be observed for the interaction of RIIα and RIIβ against myrCα1 versus Cα2 (for rate and equilibrium constants see Table 1).
In order to investigate the binding behavior of PKI, GST-PKIα was immobilized on sensor chips as described previously , and various concentrations of Cα2, Cα1, myrCα1 and, for comparison, mouse Cα1 were run at a flow rate of 30 μL/min over the sensor chips. This revealed a KD for all C subunits and PKIα at a range around 0,4 nM where the myrCα1 displayed a slightly faster association rate compared to Cα1 (4.9 × 106 and 3.2 × 106 M-1s-1, respectively) with all the dissociation rates being similar (1.5 × 10-3 s-1) (Table 2). SPR measurements with single concentrations demonstrated almost identical shapes of the curves (Figure 7), indicating comparable association and dissociation rates. In order to determine accurate association rate constants, different concentrations of the respective C subunits were applied (results not shown), leading again to the conclusion that the binding activities of Cα2 and Cα1 for PKIα are highly similar.
At the protein level Cα1 and Cα2 are 97% homologous and only differ at the N-terminal end. Based on this we investigated to what extent differences at the N-terminus may influence splice variant-specific activities that may have biological importance. We found that Cα2 expressed in bacteria was not captured by inclusion bodies as was the case with Cα1. Moreover, the specific activity of Cα2 was lower compared to Cα1. Apart from these differences we observed that Cα2 was highly similar to Cα1 in all parameters measured. This included association of Cα2 with RI and RII to form cAMP-sensitive holoenzymes both in vivo and in vitro. Furthermore, Km values of Cα2 for Kemptide and ATP were comparable to those determined for Cα1. This was also the case for the ability of RI, RII and PKI to inhibit Cα2 enzyme activity in vitro (data not shown). Finally, KD values as measured by SPR were shown to be comparable between Cα1 and Cα2 towards the RI and RII subunits as well as PKI.
Several reports imply that N-terminal modifications of Cα1 introduce specific features that may have biological consequences. To this end it has been suggested that phosphorylation of Ser10 in Cα1 introduces an electrostatic force which may help the C subunit to remain soluble even when myristylated [55;56]. Moreover, two reports have demonstrated that the N-terminal myristyl moiety of Cα1 is embedded in a hydrophobic pocket encompassed in the large lobe [57;58]. Mutation of Gly1 to Ala rendering the Cα1 non-myristylated, demonstrated that myristylation was non-essential for conformation and enzyme activation, and was not required for Cα1 interaction with other proteins including various substrates and the R subunits [21, 59]. The fact that Cα2 is not myristylated and displays comparable activities with myristylated Cα1 suggests that myristylation is not essential for catalytic activity, holoenzyme formation and inhibition by PKI. This is further supported in that deletion of the entire Cα1 N-terminus did not severely interfere with catalytic activity and inhibitor binding despite that deletion caused thermo instability . This also suggests that the amino acids 2 (Asn) and 10 (Ser) of Cα1 are not essential for activity a suggestion which is supported by our results on Cα2.
Cα1 and Cβ1 which are 100% identical at the N-terminus, but only 91% identical in the sequence encode by exon 2 through 10, have different apparent sizes (40 and 41 kDa) and possess distinct biochemical properties both in vitro and in vivo [60; 31]. These differences include differential Km values for certain peptide substrates and that Cα1 but not Cβ1 is inhibited by substrate concentrations above 100 μM. In addition, they display distinct IC50 values for PKI and RIIα. Taken together with our results this may suggest that the amino acid sequence encoded by exon 2 through 10 and not exon 1 influence C subunit activities such as holoenzyme formation, enzyme activity and inhibition by R and PKI. This may further imply that Cα1 and Cβ1 have distinct roles in regulating cellular processes. This was recently shown in T cells which express Cα1, Cβ1 and Cβ2. In that study Cα1, but none of the Cβ forms, mediated the inhibitory effect of cAMP on immune cell reactivity in vivo [17;61]. In light of these observations it is also of interest to note that Cα2 but not Cα1 is required for sperm cell forward velocity and male fertility, despite 100% identity at the amino acid sequence encoded by exon 2 through 10 [20;62]. However, since Cα2 is the sole C subunit in sperm cells [9;10;63], the difference observed may only be ascribed to tissue-specific expression and not sequence-specific differences.
In contrast to Cα1 it is expected that the hydrophobic pocket in which the myristyl group is submersed in Cα1, is constitutively empty and exposed to the surroundings at all time in non-myristylated Cα2. It has been speculated whether exposure of the hydrophobic pocket would introduce more lipophilic properties to the Cα2 subunit . Support for such a hypothesis is found in a by a study demonstrating that binding of Cα1 to RII induced a unique conformation that is associated with exposure of the hydrophobic pocket to the surroundings due to increase in N-terminal flexibility of the N-myristate away from the large lobe. This renders Cα1 more hydrophobic and promotes membrane association of the PKA II holoenzyme only . Therefore it may be suggested that exposure of the hydrophobic pocket serves features such as isoform specific features and subcellular localization of the C subunit. To this end it is interesting to note that Cα2 is associated with the sperm tail in the presence of detergent treatment with 1% Triton X-100 .and, after a challenge with 2 mM cAMP . This may be indicative of a direct association of Cα2 with subcellular structures. To what extent such attachment involves the hydrophobic pocket remains unknown. In other cells and tissues, C subunits targeted to subcellular structures independent of the R subunit and traditional A-kinase anchoring proteins have been demonstrated. To day a number of C subunit binding proteins have been identified. These include PKI, A-kinase interacting protein 1 (AKIP1), homologous to AKAP95 (HA95), inhibitor of NFkappaB kinase (IκB), Caveolin-1 and p75 neutrophine receptor (p75NTR) [65–69]. To what extent Cα2 is targeted to the sperm cell midpiece through a C interaction protein and if specificity of binding is retained in the hyper variable N-terminal end remains to be shown. However, it should be noted that deamination of the Asn2 moiety in Cα1 helps fine-tuning enzyme distribution within the cell in vivo. Moreover, p75NTR was shown to specifically bind to the Cβ splice variant Cβ4ab , which is encoded with unique N-terminal domain that may not undergo the same posttranslational modifications as Cα1 [15;69]. Together this may imply that the N-terminal end may be important for targeting and specificity of subcellular localization of the various C subunits.
Our study demonstrates that N-terminal sequence encoded by alternative use of exons upstream of exon 2 in the PRKACA gene does not influence C subunit activities such as holoenzyme formation, cAMP sensitivity, enzyme activity as well as inhibition by RI, RII and PKI. Based on several studies it may be suggested that the N-terminus is involved in other C subunit features such as subcellular localization.
Protein kinase A
Alpha-form of C
Sperm-specific C subunit.
Butcher RW, Ho RJ, Meng HC, Sutherland EW: Adenosine 3',5'-monophosphate in biological materials. II. The measurement of adenosine 3',5'-monophosphate in tissues and the role of the cyclic nucleotide in the lipolytic response of fat to epinephrine. J Biol Chem. 1965, 240: 4515-4523.
Beebe SJ, Corbin JD: Cyclic nucleotide-dependent protein kinases. Edited by: Krebs, E. G. & Boyer, P. D. 1986, Academic Press, Orlando London, 43-111. 17A
Skålhegg BS, Tasken K: Specificity in the cAMP/PKA signaling pathway. Differential expression, regulation, and subcellular localization of subunits of PKA. Front Biosci. 2000, 5: D678-D693. 10.2741/Skalhegg.
Beebe SJ: The cAMP-dependent protein kinases and cAMP signal transduction. Semin Cancer Biol. 1994, 5: 285-294.
Reinton N, Haugen TB, Ørstavik S, Skålhegg BS, Hansson V, Jahnsen T, Tasken K: The gene encoding the C gamma catalytic subunit of cAMP-dependent protein kinase is a transcribed retroposon. Genomics. 1998, 49: 290-297. 10.1006/geno.1998.5240.
Beebe SJ, Øyen O, Sandberg M, Frøysa A, Hansson V, Jahnsen T: Molecular cloning of a tissue-specific protein kinase (C gamma) from human testis--representing a third isoform for the catalytic subunit of cAMP-dependent protein kinase. Mol Endocrinol. 1990, 4: 465-475. 10.1210/mend-4-3-465.
Zimmermann B, Chiorini JA, Ma Y, Kotin RM, Herberg FW: PrKX is a novel catalytic subunit of the cAMP-dependent protein kinase regulated by the regulatory subunit type I. J Biol Chem. 1999, 274: 5370-5378. 10.1074/jbc.274.9.5370.
Showers MO, Maurer RA: Cloning of cDNA for the catalytic subunit of cAMP-dependent protein kinase. Methods Enzymol. 1988, 159: 311-318.
San Agustin JT, Witman GB: Differential expression of the C(s) and Calpha1 isoforms of the catalytic subunit of cyclic 3',5'-adenosine monophosphate-dependent protein kinase testicular cells. Biol Reprod. 2001, 65: 151-164. 10.1095/biolreprod65.1.151.
Reinton N, Ørstavik S, Haugen TB, Jahnsen T, Tasken K, Skålhegg BS: A novel isoform of human cyclic 3',5'-adenosine monophosphate-dependent protein kinase, c alpha-s, localizes to sperm midpiece. Biol Reprod. 2000, 63: 607-611. 10.1095/biolreprod63.2.607.
Desseyn JL, Burton KA, McKnight GS: Expression of a nonmyristylated variant of the catalytic subunit of protein kinase A during male germ-cell development. Proc Natl Acad Sci USA. 2000, 97: 6433-6438. 10.1073/pnas.97.12.6433.
Uhler MD, Chrivia JC, McKnight GS: Evidence for a second isoform of the catalytic subunit of cAMP-dependent protein kinase. J Biol Chem. 1986, 261: 15360-15363.
Wiemann S, Kinzel V, Pyerin W: Isoform C beta 2, an unusual form of the bovine catalytic subunit of cAMP-dependent protein kinase. J Biol Chem. 1991, 266: 5140-5146.
Guthrie CR, Skålhegg BS, McKnight GS: Two novel brain-specific splice variants of the murine Cbeta gene of cAMP-dependent protein kinase. J Biol Chem. 1997, 272: 29560-29565. 10.1074/jbc.272.47.29560.
Ørstavik S, Reinton N, Frengen E, Langeland BT, Jahnsen T, Skålhegg BS: Identification of novel splice variants of the human catalytic subunit Cbeta of cAMP-dependent protein kinas. Eur J Biochem. 2001, 268: 5066-5073. 10.1046/j.0014-2956.2001.02429.x.
Kvissel AK, Ørstavik S, Øistad P, Rootwelt T, Jahnsen T, Skålhegg BS: Induction of Cbeta splice variants and formation of novel forms of protein kinase A type II holoenzymes during retinoic acid-induced differentiation of human NT2 cells. Cell Signal. 2004, 16: 577-587. 10.1016/j.cellsig.2003.08.014.
Funderud A, Henanger HH, Hafte TT, Amieux PS, Ørstavik S, Skålhegg BS: Identification, cloning and characterization of a novel 47 kDa murine PKA C subunit homologous to human and bovine Cbeta2. BMC Biochem. 2006, 7: 20-10.1186/1471-2091-7-20.
Qi M, Zhuo M, Skålhegg BS, Brandon EP, Kandel ER, McKnight GS, Idzerda RL: Impaired hippocampal plasticity in mice lacking the Cbeta1 catalytic subunit of cAMP-dependent protein kinase. Proc Natl Acad Sci USA. 1996, 93: 1571-1576. 10.1073/pnas.93.4.1571.
Gamm DM, Baude EJ, Uhler MD: The major catalytic subunit isoforms of cAMP-dependent protein kinase have distinct biochemical properties in vitro and in vivo. J Biol Chem. 1996, 271: 15736-15742. 10.1074/jbc.271.26.15736.
Skålhegg BS, Huang Y, Su T, Idzerda RL, McKnight GS, Burton KA: Mutation of the Calpha subunit of PKA leads to growth retardation and sperm dysfunction. Mol Endocrinol. 2002, 16: 630-639. 10.1210/me.16.3.630.
Clegg CH, Ran W, Uhler MD, McKnight GS: A mutation in the catalytic subunit of protein kinase A prevents myristylation but does not inhibit biological activity. J Biol Chem. 1989, 264: 20140-20146.
Jedrzejewski PT, Girod A, Tholey A, Konig N, Thullner S, Kinzel V, Bossemeyer D: A conserved deamidation site at Asn 2 in the catalytic subunit of mammalian cAMP-dependent protein kinase detected by capillary LC-MS and tandem mass spectrometry. Protein Sci. 87: 457-469. 199
Toner-Webb J, van Patten SM, Walsh DA, Taylor SS: Autophosphorylation of the catalytic subunit of cAMP-dependent protein kinase. J Biol Chem. 1992, 267: 25174-25180.
Yonemoto W, McGlone ML, Grant B, Taylor SS: Autophosphorylation of the catalytic subunit of cAMP-dependent protein kinase in Escherichia coli. Protein Eng. 1997, 10: 915-925. 10.1093/protein/10.8.915.
Herberg FW, Zimmermann B, McGlone M, Taylor SS: Importance of the A-helix of the catalytic subunit of cAMP-dependent protein kinase for stability and for orienting subdomains at the cleft interface. Protein Sci. 1997, 6: 569-579.
Kvissel AK, Ørstavik S, Eikvar S, Brede G, Jahnsen T, Collas P, Akusjarvi G, Skålhegg BS: Involvement of the catalytic subunit of protein kinase A and of HA95 in pre-mRNA splicing. Exp Cell Res. 2007, 313: 2795-2809. 10.1016/j.yexcr.2007.05.014.
Skålhegg BS, Landmark BF, Doskeland SO, Hansson V, Lea T, Jahnsen T: Cyclic AMP-dependent protein kinase type I mediates the inhibitory effects of 3',5'-cyclic adenosine monophosphate on cell replication in human T lymphocytes. J Biol Chem. 1992, 267: 15707-15714.
Diskar M, Zenn HM, Kaupisch A, Prinz A, Herberg FW: Molecular basis for isoform-specific autoregulation of protein kinase A. Cellular Signalling. 2007, 19: 2024-2034. 10.1016/j.cellsig.2007.05.012.
Herberg FW, Taylor SS: Physiological inhibitors of the catalytic subunit of cAMP-dependent protein kinase: effect of MgATP on protein-protein interactions. Biochemistry. 1993, 32: 14015-14022. 10.1021/bi00213a035.
Slice LW, Taylor SS: Expression of the catalytic subunit of cAMP-dependent protein kinase in Escherichia coli. J Biol Chem. 1989, 264: 20940-20946.
Olsen SR, Uhler MD: Affinity purification of the C alpha and C beta isoforms of the catalytic subunit of cAMP-dependent protein kinase. J Biol Chem. 1989, 264: 18662-18666.
Thullner S, Gesellchen F, Wiemann S, Pyerin W, Kinzel V, Bossemeyer D: The protein kinase A catalytic subunit Cbeta2: molecular characterization and distribution of the splice variant. Biochem J. 2000, 351: 123-132. 10.1042/0264-6021:3510123.
Bertinetti D, Schweinsberg S, Hanke SE, Schwede F, Bertinetti O, Drewianka S, Genieser HG, Herberg FW: Chemical tools selectively target components of the PKA system. BMC Chem Biol. 2009, 9: 3-10.1186/1472-6769-9-3.
Gesellchen F, Zimmermann B, Herberg FW: Direct optical detection of protein-ligand interactions. Methods Mol Biol. 2005, 305: 17-46.
Löfås S, Malmqvist M, Rönnberg I, Stenberg E, Liedberg B, Lundström I: Quantitative determination of surface concentration of protein with surface plasmon resonance using radio labeled proteins. Sensors and Actuators B: Chemical. 1991, 5: 79-84. 10.1016/0925-4005(91)80224-8.
Herberg FW, Dostmann WR, Zorn M, Davis S, Taylor SS: Crosstalk between domains in the regulatory subunit of cAMP-dependent protein kinase: influence of amino terminus on cAMP binding and holoenzyme formation. Biochemistry. 1994, 33: 7485-7494. 10.1021/bi00189a057.
Hahnefeld C, Drewianka S, Herberg FW: Determination of kinetic data using surface plasmon resonance biosensors. Methods Mol Med. 2004, 94: 299-320.
Herberg FW, Doyle ML, Cox S, Taylor SS: Dissection of the nucleotide and metal-phosphate binding sites in cAMP-dependent protein kinase. Biochemistry. 1999, 38: 6352-6360. 10.1021/bi982672w.
Pariset C, Feinberg J, Dacheux JL, Øyen O, Jahnsen T, Weinman S: Differential expression and subcellular localization for subunits of cAMP-dependent protein kinase during ram spermatogenesis. J Cell Biol. 1989, 109: 1195-1205. 10.1083/jcb.109.3.1195.
Pariset C, Weinman S: Differential localization of two isoforms of the regulatory subunit RII alpha of cAMP-dependent protein kinase in human sperm: biochemical and cytochemical study. Mol Reprod Dev. 1994, 39: 415-422. 10.1002/mrd.1080390410.
Øye O, Myklebust F, Scott JD, Cadd GG, McKnight GS, Hansson V, Jahnsen T: Subunits of cyclic adenosine 3',5'-monophosphate-dependent protein kinase show differential and distinct expression patterns during germ cell differentiation: alternative polyadenylation in germ cells gives rise to unique smaller-sized mRNA species. Biol Reprod. 1990, 43: 46-54. 10.1095/biolreprod43.1.46.
Corbin JD, Sugden PH, West L, Flockhart DA, Lincoln TM, McCarthy D: Studies on the properties and mode of action of the purified regulatory subunit of bovine heart adenosine 3':5'-monophosphate-dependent protein kinase. J Biol Chem. 1978, 253: 3997-4003.
Cook PF, Neville ME, Vrana KE, Hartl FT, Roskoski R: Adenosine cyclic 3',5'-monophosphate dependent protein kinase: kinetic mechanism for the bovine skeletal muscle catalytic subunit. Biochemistry. 1982, 21: 5794-5799. 10.1021/bi00266a011.
Landmark BF, Fauske B, Eskild W, Skålhegg B, Lohmann SM, Hansson V, Jahnsen T, Beebe SJ: Identification, characterization, and hormonal regulation of 3', 5'-cyclic adenosine monophosphate-dependent protein kinases in rat Sertoli cells. Endocrinology. 1991, 129: 2345-2354. 10.1210/endo-129-5-2345.
Landmark BF, Øyen O, Skålhegg BS, Fauske B, Jahnsen T, Hansson V: Cellular location and age-dependent changes of the regulatory subunits of cAMP-dependent protein kinase in rat testis. J Reprod Fertil. 1993, 99: 323-334. 10.1530/jrf.0.0990323.
Ørstavik S, Funderud A, Hafte TT, Eikvar S, Jahnsen T, Skålhegg BS: Identification and characterization of novel PKA holoenzymes in human T lymphocytes. FEBS J. 2005, 272: 1559-1567. 10.1111/j.1742-4658.2005.04568.x.
Larsen AC, Kvissel AK, Hafte TT, Avellan CI, Eikvar S, Rootwelt T, Ørstavik S, Skålhegg BS: Inactive forms of the catalytic subunit of protein kinase A are expressed in the brain of higher primates. FEBS J. 2008, 275: 250-262.
Burton KA, Treash-Osio B, Muller CH, Dunphy EL, McKnight GS: Deletion of type IIalpha regulatory subunit delocalizes protein kinase A in mouse sperm without affecting motility or fertilization. J Biol Chem. 1999, 274: 24131-24136. 10.1074/jbc.274.34.24131.
Amieux PS, Cummings DE, Motamed K, Brandon EP, Wailes LA, Le K, Idzerda RL, McKnight GS: Compensatory regulation of RIalpha protein levels in protein kinase A mutant mice. J Biol Chem. 1997, 272: 3993-3998. 10.1074/jbc.272.7.3993.
Amieux PS, McKnight GS: The essential role of RI alpha in the maintenance of regulated PKA activity. Ann N Y Acad Sci. 2002, 968: 75-95. 10.1111/j.1749-6632.2002.tb04328.x.
Gibson RM, Taylor SS: Dissecting the cooperative reassociation of the regulatory and catalytic subunits of cAMP-dependent protein kinase. Role of Trp-196 in the catalytic subunit. J Biol Chem. 1997, 272: 31998-2005. 10.1074/jbc.272.51.31998.
Levy FO, Rasmussen AM, Tasken K, Skålhegg BS, Huitfeldt HS, Funderud S, Smeland EB, Hansson V: Cyclic AMP-dependent protein kinase (cAK) in human B cells: co-localization of type I cAK (RI alpha 2 C2) with the antigen receptor during anti-immunoglobulin-induced B cell activation. Eur J Immunol. 1996, 26: 1290-1296. 10.1002/eji.1830260617.
Torgersen KM, Vaage JT, Levy FO, Hansson V, Rolstad B, Tasken K: Selective activation of cAMP-dependent protein kinase type I inhibits rat natural killer cell cytotoxicity. J Biol Chem. 1997, 272: 5495-5500. 10.1074/jbc.272.9.5495.
Zimmermann B, Schweinsberg S, Drewianka S, Herberg FW: Effect of metal ions on high-affinity binding of pseudosubstrate inhibitors to PKA. Biochem J. 2008, 413: 93-101. 10.1042/BJ20071665.
McLaughlin S, Aderem A: The myristoyl-electrostatic switch: a modulator of reversible protein-membrane interactions. Trends Biochem Sci. 1995, 20: 272-276. 10.1016/S0968-0004(00)89042-8.
Hanakam F, Albrecht R, Eckerskorn C, Matzner M, Gerisch G: Myristoylated and non-myristoylated forms of the pH sensor protein hisactophilin II: intracellular shuttling to plasma membrane and nucleus monitored in real time by a fusion with green fluorescent protein. EMBO J. 1996, 15: 2935-2943.
Bossemeyer D, Engh RA, Kinzel V, Ponstingl H, Huber R: Phosphotransferase and substrate binding mechanism of the cAMP-dependent protein kinase catalytic subunit from porcine heart as deduced from the 2.0 A structure of the complex with Mn2+ adenylyl imidodiphosphate and inhibitor peptide PKI(5-24). EMBO J. 1993, 12: 849-859.
Zheng JH, Knighton DR, Parello J, Taylor SS, Sowadski JM: Crystallization of catalytic subunit of adenosine cyclic monophosphate-dependent protein kinase. Methods Enzymol. 1991, 200: 508-521.
Clegg CH, Correll LA, Cadd GG, McKnight GS: Inhibition of intracellular cAMP-dependent protein kinase using mutant genes of the regulatory type I subunit. J Biol Chem. 1987, 262: 13111-13119.
Uhler MD, Carmichael DF, Lee DC, Chrivia JC, Krebs EG, McKnight GS: Isolation of cDNA clones coding for the catalytic subunit of mouse cAMP-dependent protein kinase. Proc Natl Acad Sci USA. 1986, 83: 1300-1304. 10.1073/pnas.83.5.1300.
Funderud A, Ås-Hanssen K, Aksaas AK, Hafte TT, Corthay A, Munthe LA, Ørstavik S, Skålhegg BS: Isoform-specific regulation of immune cell reactivity by the catalytic subunit of protein kinase A (PKA). Cell Signal. 2009, 21: 274-281. 10.1016/j.cellsig.2008.10.013.
Nolan MA, Babcock DF, Wennemuth G, Brown W, Burton KA, McKnight GS: Sperm-specific protein kinase A catalytic subunit Calpha2 orchestrates cAMP signaling for male fertility. Proc Natl Acad Sci USA. 2004, 101: 13483-13488. 10.1073/pnas.0405580101.
San Agustin JT, Leszyk JD, Nuwaysir LM, Witman GB: The catalytic subunit of the cAMP-dependent protein kinase of ovine sperm flagella has a unique amino-terminal sequence. J Biol Chem. 1998, 273: 24874-24883. 10.1074/jbc.273.38.24874.
Gangal M, Clifford T, Deich J, Cheng X, Taylor SS, Johnson DA: Mobilization of the A-kinase N-myristate through an isoform-specific intermolecular switch. Proc Natl Acad Sci USA. 1999, 96: 12394-12399. 10.1073/pnas.96.22.12394.
Sastri M, Barraclough DM, Carmichael PT, Taylor SS: A-kinase-interacting protein localizes protein kinase A in the nucleus. Proc Natl Acad Sci USA. 2005, 102: 349-354. 10.1073/pnas.0408608102.
Han I, Xue Y, Harada S, Ørstavik S, Skålhegg B, Kieff E: Protein kinase A associates with HA95 and affects transcriptional coactivation by Epstein-Barr virus nuclear proteins. Mol Cell Biol. 2002, 22: 2136-2146. 10.1128/MCB.22.7.2136-2146.2002.
Zhong H, SuYang H, Erdjument-Bromage H, Tempst P, Ghosh S: The transcriptional activity of NF-kappaB is regulated by the IkappaB-associated PKAc subunit through a cyclic AMP-independent mechanism. Cell. 1997, 89: 413-424. 10.1016/S0092-8674(00)80222-6.
Razani B, Lisanti MP: Two distinct caveolin-1 domains mediate the functional interaction of caveolin-1 with protein kinase A. Am J Physiol Cell Physiol. 2001, 281: C1241-C1250.
Higuchi H, Yamashita T, Yoshikawa H, Tohyama M: PKA phosphorylates the p75 receptor and regulates its localization to lipid rafts. EMBO J. 2003, 22: 1790-1800. 10.1093/emboj/cdg177.
Pepperkok R, Hotz-Wagenblatt A, Konig N, Girod A, Bossemeyer D, Kinzel V: Intracellular distribution of mammalian protein kinase A catalytic subunit altered by conserved Asn2 deamidation. J Cell Biol. 2000, 148: 715-726. 10.1083/jcb.148.4.715.
We wish to thank Michaela Hansch (1) and Sissel Eikvar (2,3) for technical support, Susanne Hanke and Diana Lang for mass spectrometry analysis, Sonja Schweinsberg and Biaffin GmbH & Co KG for SPR-assistance, Dr. Mandy Diskar for the NMT-vector. Special thanks to Dr. Daniela Bertinetti for help with preparing figures. This work was supported by the Norwegian Research Council and University of Oslo, to BSS and Deutsche Forschungsgemeinschaft (DFG, He1818/6) to FWH. FWH's group is a member in the EU FP6 Proteome Binders consortium.
MMV has written the manuscript and has designed an contributed to the experiments in figures 3 through 7 and table 1 and 2. HMZ has contributed to the BIACORE experiments. EM has performed the experiments in figures 1 and 2. HVB has made recombinant proteins for Cα1 and Cα2 and contributed to the experiments in figure 3. FWH and BSS have conceived the ideas to the manuscript and contributed to the writing. All authors read and approved the final manuscript.
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Vetter, M.M., Zenn, H., Méndez, E. et al. The testis-specific Cα2 subunit of PKA is kinetically indistinguishable from the common Cα1 subunit of PKA. BMC Biochem 12, 40 (2011) doi:10.1186/1471-2091-12-40
- Catalytic subunit
- splice variants