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Table 1 Synthesis rate on the RNA template for the PCR-based α-complementation fidelity assay at different cation concentrations

From: Alternative divalent cations (Zn2+, Co2+, and Mn2+) are not mutagenic at conditions optimal for HIV-1 reverse transcriptase activity

Cation

a Optimal concentration

b Maximal extension rate

b Average extension rate

mM

nts/sec

nts/sec

Mg2+

2 (1.6)

7.4 ± 1.9

1.8 ± 0.5

Mn2+

0.4 (0.15)

1.2 ± 0.3

0.48 ± 0.09

Co2+

0.25 (0.07)

1.1 ± 0.1

0.23 ± 0.05

Zn2+

0.4 (0.15)

0.19 ± 0.10

0.03 ± 0.02

  1. aThe concentration of free cation is shown in parenthesis. Free cation concentration for Mg2+ was calculated as described in Materials and Methods using the dissociation constant for Mg2+ and ATP. Free concentrations for alternative cations (Mn2+, Co2+, and Zn2+) were approximately using the dissociation constant for Mg2+ and ATP.
  2. bValues are averages from 3 experiments ± standard deviation. Rates were calculated as described in Materials and Methods.