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Table 3 Oligonucleotides used for gene amplification and site-directed mutagenesis

From: Nickel quercetinase, a “promiscuous” metalloenzyme: metal incorporation and metal ligand substitution studies

Name

Nucleotide sequence (5′ → 3′)

Application

quedfor

TGACCATCGAATACGCCACCCGTCACC

Amplification of queD

quedrev

GACGTCGTACTGCTCGGGCACGGTC

strepfor

ATAAGAATGCGGCCGCATTAGAATGGAGCCACCCGCAGTTCGAAAAATGAGATCCGGCTGCTAACAAAGCCCGAAAGG

Exchange of His6-tag for StrepII-tag

streprev

ATAAGAATGCGGCCGCAAGCTTCCTTCCCTCGATACTCCCGGTGTGC

gfpfor

TATAAGCTTGCCGGTGCGGAAAATC

Amplification of the EGFP gene

gfprev

TATAGCGGCCGCCTGGTACAGTTCATCCATG

H69Afor

CCTCGCACGCGGACACCTACG

Exchange of His69 for Ala

H69Arev

CGGCGGGGATCACCTCGCCCTTG

H71Afor

CGCCCACTCGGCCGCGGACACCTACGAGGTCTTC

Exchange of His71 for Ala

H71Arev

GGGATCACCTCGCCCTTGGGGCCCTCGCAG

H115Afor

ATGGAACGCCACCACTCGCAGGTCG

Exchange of His115 for Ala

H115Arev

GCGGTAGGCGGCCACGCAGTTCTTCGGTACGAAGC

E76Hfor/E76Dfor

CGTCTTCTACATCACCCAGGGC

Forward primer for the exchange of Glu76 for His or Asp

E76Hrev

TGGTAGGTGTCCGCGTGCGAGTGG

Reverse primer for the exchange of Glu76 for His

E76Drev

TCGTAGGTGTCCGCGTGCGAG

Reverse primer for the exchange of Glu76 for Asp

  1. Recognition sites for restriction endonucleases are italicized.