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Table 4 Apparent affinities of clones from D5-Lib-II selection against 5-Helix

From: Side chain requirements for affinity and specificity in D5, an HIV-1 antibody derived from the VH1-69 germline segment

 

On-phage (bivalent)

Off-phage (monovalent)

Clone

IC50for 5-HelixA/nM

IC50for 6-Helix-FdA/nM

IC50for 5-HelixA/nM

IC50for 6-Helix-FdA/nM

D5 WT

0.1 (0.07-0.1)

11 (8–15)

7.3 (5.3-10)

290

25B8

3.1 (1.8-5.3)

~100

NDB

NDB

25C10

1.8 (1.3-2.7)

28 (21–37)

56 (40–79)

NC C

25D8

5.8 (4.2-7.5)

~3000

NDB

NDB

25A10

1.6 (1.3-2.0)

260 (150–450)

5.4 (3.8-7.7)

~500

25D9

1.7 (1.4-2.1)

230 (150–360)

NDB

NDB

25G8

7.2 (4.2-12.3)

300 (120–750)

NDB

NDB

25C6

32 (24–44)

~1000

NDB

NDB

25C12

100 (31–300)

~1000

NDB

NDB

25D6

0.5 (0.3-0.8)

~80

NDB

NDB

25D3

17 (9.9-30)

170 (70–390)

NDB

NDB

25F1

0.9 (0.7-1.2)

40 (20–79)

NDB

NDB

25B6

0.3 (0.2-0.4)

23 (15–36)

0.6 (0.3-1.0)

94 (56–160)

25F10

0.2 (0.2-0.3)

22 (16–30)

NDB

NDB

25A12

2.2 (1.2-4.0)

220 (70–670)

34 (23–52)

280 (120–640)

  1. A 95% Confidence intervals from data fitting are shown in parentheses.
  2. B ND, not determined.
  3. CNC, no convergence observed upon data fitting, suggesting weak or insignificant binding.