Figure 1
From: A standard numbering scheme for thiamine diphosphate-dependent decarboxylases
Alignment of a query sequence and the reference sequence from the web interface of the numbering method . Alignment of a query sequence (here: branched-chain alpha-ketoacid decarboxylase from L. lactis, genbank: 75369656) to the reference sequence (Sc PDC, swissprot: P06169, PDB: 2VK8). By positioning the cursor on an amino acid (here: proline), the standard numbering (here: 168) as derived from the reference sequence and the absolute numbering of the respective query sequence (here: 165) as well as annotation information (here: end of the PYR domain) are displayed. All residues are highlighted for which annotation information is available in the TEED [1].