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Table 2 Single stranded DNA substrates used

From: Analysis of DNA relaxation and cleavage activities of recombinant Mycobacterium tuberculosis DNA topoisomerase I from a new expression and purification protocol

Substrate

Source

Primers

Substrate size (bases)

%GC

PBAD

pBAD/thio

Left-ATGCCATAGCATTTTTATCG

Right-*GACCGGTACGCGTAGAATCG

556

47

MdnaK

M. tuberculosis dnaK

Left-*GAACCCGTTGTTCTTAGACGAG

Right-*GGGTAACATCAAGCAGCAGAAC

317

62

Mtop

M. tuberculosis topA

Left-*GTAGAAGTTGTTGAGCCAGT

Right-TACTCGTCGATCATCAAGAC

216

61

  1. * Primer 32P labeled at 5'end to analyze extended strand as cleavage substrate after denaturation of the PCR product. The left and right primers of MdnaK were utilized in separate experiments.