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Figure 9 | BMC Biochemistry

Figure 9

From: Computational identification and experimental characterization of substrate binding determinants of nucleotide pyrophosphatase/phosphodiesterase 7

Figure 9

SM position in NPP7 relative to mutated residues. Structure shown represents an energy-minimized snapshot from the MD simulation. Distances from sidechains to SM are 2.4 Ã… (Y166 to sphingoid tail), 2.5 Ã… (L107 to choline), 2.9Ã… (E169 to palmitoyl tail), 3.7 Ã… (F275 aromatic centroid to choline), 5.5 Ã… (Y142 to sphingoid tail), and 6.9 Ã… (F80 to sphingoid tail). Mutation of F141 (yellow) to serine was reported by Duan, et al. to substantially reduce sphingomyelinase activity of NPP7 [15]. Distance between F141 and the palmitoyl tail is 2.8 Ã….

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